STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FCF1FCF1 rRNA-processing protein. (217 aa)    
Predicted Functional Partners:
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.989
UTP14A
Uncharacterized protein.
   
 0.986
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.983
UTP3
UTP3 small subunit processome component.
   
 0.982
NOP58
NOP58 ribonucleoprotein.
   
 0.979
RCL1
RNA terminal phosphate cyclase like 1.
   
 0.976
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.976
RRP7A
Ribosomal RNA processing 7 homolog A.
   
 0.973
WDR46
WD repeat domain 46.
   
 0.972
WDR43
WD repeat domain 43.
   
 0.971
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.