STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAS1R3Taste 1 receptor member 3. (838 aa)    
Predicted Functional Partners:
SCNN1B
Sodium channel epithelial 1 beta subunit; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.701
IGSF21
Immunoglobin superfamily member 21.
    
 
 0.669
SCNN1G
Sodium channel epithelial 1 gamma subunit; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.662
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
      
 0.662
ZBTB48
Zinc finger and BTB domain containing 48.
    
 
 0.661
VPS13D
Vacuolar protein sorting 13 homolog D.
      
 0.655
H3B0S1_LATCH
Uncharacterized protein.
      
 0.652
NOL9
Nucleolar protein 9.
      
 0.601
ALDH4A1
Aldehyde dehydrogenase 4 family member A1; Belongs to the aldehyde dehydrogenase family.
     
 0.560
CALHM1
Calcium homeostasis modulator 1.
      
 0.557
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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