STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAL2Mal, T cell differentiation protein 2 (gene/pseudogene). (103 aa)    
Predicted Functional Partners:
H3B3K5_LATCH
Uncharacterized protein.
   
 
 0.625
MDFIC
Uncharacterized protein.
      
 0.594
TPD52L2
TPD52 like 2.
   
 
 0.592
FRMD4B
FERM domain containing 4B.
   
  
 0.581
CDC42
Cell division cycle 42.
      
 0.556
P4HA1
Prolyl 4-hydroxylase subunit alpha 1.
      
 0.527
H3A964_LATCH
Si:ch211-191a24.4.
      
 0.474
SH3YL1
SH3 and SYLF domain containing 1.
   
  
 0.440
RAD1
RAD1 checkpoint DNA exonuclease.
      
 0.434
TALDO1
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
      
 0.431
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.