STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102345482Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family. (147 aa)    
Predicted Functional Partners:
LOC102365063
Apolipoprotein A-IV b, tandem duplicate 2.
    
 0.501
LOC102355730
Uncharacterized protein.
    
 0.443
H2ZY94_LATCH
Si:dkey-199f5.8.
    
 0.443
LOC102355454
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4.
    
 0.443
B4GALT3
Uncharacterized protein.
    
 0.443
B4GALT2
Beta-1,4-galactosyltransferase 2.
    
 0.443
LOC102358769
Uncharacterized protein.
    
 0.443
B4GALT6
Beta-1,4-galactosyltransferase 6.
    
 0.432
B4GALT5
Beta-1,4-galactosyltransferase 5.
    
 0.432
VAMP7
Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.
     
 0.414
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.