STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF3Transcription factor 3. (694 aa)    
Predicted Functional Partners:
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.859
MYOD1
Myogenic factor.
    
 0.848
LMO2
LIM domain only 2.
    
 0.766
MYOG
Myogenin.
   
 0.744
ID1
Inhibitor of DNA binding 1, HLH protein.
    
 
 0.735
ASCL1
Achaete-scute family bHLH transcription factor 1.
   
 0.735
CTNNB1
Catenin beta 1.
    
 0.725
MYF6
Myogenic factor 6.
    
 0.714
LOC102367663
Achaete-scute family bHLH transcription factor 1b.
   
 0.711
TCF21
Transcription factor 21.
    
 0.700
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.