STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M3XID5_LATCHUncharacterized protein. (182 aa)    
Predicted Functional Partners:
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
   0.830
SPAG17
Sperm associated antigen 17.
    
 
 0.635
H3BIP2_LATCH
Uncharacterized protein.
   
 
 0.555
H3BIP4_LATCH
ASH domain-containing protein.
   
 
 0.555
CCDC189
Uncharacterized protein.
    
 
 0.554
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.551
POLR3C
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.547
LRRC72
Uncharacterized protein.
    
   0.547
SPAG6
Sperm associated antigen 6.
    
 
 0.529
WDR93
WD repeat domain 93.
   
  
 0.512
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.