STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM67Transmembrane protein 67. (987 aa)    
Predicted Functional Partners:
TCTN1
Tectonic family member 1.
   
 
 0.979
TMEM216
Transmembrane protein 216.
   
 
 0.974
B9D1
B9 domain containing 1.
     
 0.974
H3A0S5_LATCH
Uncharacterized protein.
     
 0.973
MKS1
MKS transition zone complex subunit 1.
     
 0.954
B9D2
B9 domain containing 2.
     
 0.929
NPHP1
SH3 domain-containing protein.
   
  
 0.928
NPHP4
Nephrocystin 4.
   
  
 0.875
CEP290
Centrosomal protein 290.
   
  
 0.859
TMEM80
Transmembrane protein 80.
   
 
 0.833
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.