STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102360442Protein S100; Belongs to the S-100 family. (94 aa)    
Predicted Functional Partners:
SARNP
SAP domain containing ribonucleoprotein.
   
 0.776
LOC102351157
SAP domain-containing protein.
   
 0.776
ALYREF
Aly/REF export factor.
   
 0.764
DDX39B
DExD-box helicase 39B.
   
 0.755
DDX39A
DExD-box helicase 39A.
   
 0.755
THOC5
THO complex 5.
   
 0.738
THOC1
THO complex 1.
    
 0.710
ZC3H11A
Uncharacterized protein.
    
 0.687
THOC7
THO complex 7.
    
 0.673
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.634
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.