STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISOC1Isochorismatase domain containing 1. (289 aa)    
Predicted Functional Partners:
H3A8S5_LATCH
Nicotinate phosphoribosyltransferase.
  
 
 0.947
OPLAH
5-oxoprolinase, ATP-hydrolysing.
    
  0.801
QPRT
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family.
  
 
 0.623
ARG2
Arginase.
  
 
 0.617
NADSYN1
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
  
  
 0.616
AGMAT
Agmatinase; Belongs to the arginase family.
  
 
 0.615
NMNAT1
Nicotinamide-nucleotide adenylyltransferase.
    
 0.604
NMNAT3
Nicotinamide-nucleotide adenylyltransferase.
    
 0.604
NMNAT2
Nicotinamide nucleotide adenylyltransferase 2.
    
 0.604
LIN54
Lin-54 DREAM MuvB core complex component.
    
 
 0.582
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.