STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102352006Uncharacterized protein. (163 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.995
PAK1
Non-specific serine/threonine protein kinase.
   
 0.981
VAV3
Si:ch73-383g2.1.
   
 0.972
DOCK1
Dedicator of cytokinesis 1; Belongs to the DOCK family.
   
 0.961
IQGAP1
IQ motif containing GTPase activating protein 1.
   
 0.959
PAK5
Non-specific serine/threonine protein kinase.
   
 0.959
IQGAP2
IQ motif containing GTPase activating protein 2.
   
 0.959
PAK4
Non-specific serine/threonine protein kinase.
   
 0.959
NCKAP1
NCK associated protein 1.
   
 0.958
NCKAP1L
NCK associated protein 1 like.
   
 0.958
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.