STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102348796Uncharacterized protein. (497 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.982
NOD1
Nucleotide binding oligomerization domain containing 1.
   
 0.981
NOD2
Nucleotide binding oligomerization domain containing 2.
   
 0.980
H3B3L3_LATCH
NACHT domain-containing protein.
   
 0.974
TAB3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.969
TAB1
TGF-beta activated kinase 1 (MAP3K7) binding protein 1.
   
 0.961
BIRC2
Baculoviral IAP repeat containing 2.
   
 0.960
TNFAIP3
TNF alpha induced protein 3.
   
 0.957
TAB2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.956
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.948
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.