STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOT1L1Glutamic-oxaloacetic transaminase 1 like 1. (405 aa)    
Predicted Functional Partners:
GLUD1
Glutamate dehydrogenase 1b; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.982
LOC102361787
Aminotran_1_2 domain-containing protein.
   
 0.981
H2ZXP4_LATCH
Uncharacterized protein.
   
 0.981
MDH2
Malate dehydrogenase.
   
 0.977
GOT2
Aspartate aminotransferase.
  
0.970
LOC102364955
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.966
SDHA
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.965
MDH1
Malate dehydrogenase.
   
 0.965
LDHB
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.961
TST
Sulfurtransferase.
  
 
 0.953
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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