Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102688490Zgc:65997. (266 aa)    
Predicted Functional Partners:
dhrs7b
Dehydrogenase/reductase (SDR family) member 7B; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.632
dhrs11
Dehydrogenase/reductase (SDR family) member 11a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.629
dhrs7c
Dehydrogenase/reductase (SDR family) member 7Ca; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.629
rdh8
Retinol dehydrogenase 8a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.557
tlcd1
TLC domain containing 1.
      
 0.524
W5MGR1_LEPOC
RIMS binding protein 2.
      
 0.524
LOC102689673
Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.484
vars1
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.423
tgs1
LYN proto-oncogene, Src family tyrosine kinase.
    
   0.403
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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