STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LVB9_LEPOCSUEL-type lectin domain-containing protein. (76 aa)    
Predicted Functional Partners:
W5MF48_LEPOC
Teneurin transmembrane protein 4.
    
 
 0.991
szrd1
SUZ RNA binding domain containing 1.
    
 
 0.991
W5MY74_LEPOC
Si:ch211-12m10.1.
    
 
 0.991
tenm3
Si:dkey-237h12.3.
    
 
 0.991
tenm1
Teneurin transmembrane protein 1.
    
 
 0.991
W5LZ17_LEPOC
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
   
   0.990
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
   0.990
gnb3
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
   
   0.990
unc5a
Unc-5 netrin receptor A.
   
 
 0.990
frmd6
FERM domain containing 6.
    
   0.990
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.