STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102693534Uncharacterized protein. (572 aa)    
Predicted Functional Partners:
W5MKE7_LEPOC
Prostaglandin E synthase 3b (cytosolic).
   
 0.961
W5MDG7_LEPOC
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.942
W5NC99_LEPOC
Serine/threonine-protein phosphatase.
    
 0.927
tsc2
TSC complex subunit 2.
   
 0.924
aarsd1
Alanyl-tRNA synthetase domain containing 1.
  
 0.911
tbc1d7
TBC1 domain family, member 7.
    
 0.910
nr3c1
Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor).
    
 0.907
ahsa1
AHA1, activator of heat shock protein ATPase homolog 1a.
   
 
 0.904
ppid
Peptidylprolyl isomerase D.
  
 0.899
cdc37
Cell division cycle 37 homolog (S. cerevisiae).
    
 0.894
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.