STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102698056Thimet oligopeptidase 1. (529 aa)    
Predicted Functional Partners:
nts
Neurotensin.
    
 0.954
W5LWL7_LEPOC
Uncharacterized protein.
 
     0.923
LOC102695287
Uncharacterized protein.
     
 0.717
LOC102687985
Arylacetamide deacetylase.
     
 0.717
nceh1
Neutral cholesterol ester hydrolase 1b, tandem duplicate 1.
     
 0.717
lum
Lumican.
      
 0.589
mcm7
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
      
 0.588
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
      
 0.587
RIMS2
Regulating synaptic membrane exocytosis 2.
    
   0.579
aadacl4
Arylacetamide deacetylase-like 4.
     
 0.557
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.