STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LVD4_LEPOCUncharacterized protein. (86 aa)    
Predicted Functional Partners:
gna12
Guanine nucleotide binding protein (G protein) alpha 12a.
    
 0.873
gna13
Guanine nucleotide binding protein (G protein), alpha 13b.
    
 0.873
rhoc
Ras homolog family member Cb.
   
 0.726
LOC102682211
Ras homolog gene family, member Ab.
   
 0.726
W5NAW2_LEPOC
Ras homolog gene family, member Ab.
   
 0.726
rhob
Uncharacterized protein.
   
 0.726
mras
Muscle RAS oncogene homolog.
    
  0.717
rras2
RAS related 2.
    
  0.717
W5LZK3_LEPOC
Link domain-containing protein.
    
 0.698
rnd3
Rho family GTPase 3b.
   
 0.683
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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