STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LVE0_LEPOCPLA2c domain-containing protein. (205 aa)    
Predicted Functional Partners:
PLA2G12B
Phospholipase A2, group XIIB.
   
 
 0.628
pla2g7
Platelet-activating factor acetylhydrolase.
     
 0.622
pla2g4a
Phospholipase A2.
  
  
 
0.615
mapk1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
  0.612
pnpla7
Patatin-like phospholipase domain containing 7b.
   
 
 0.606
LOC102698342
Patatin-like phospholipase domain containing 6.
   
 
 0.606
pla2g12a
Phospholipase A2, group XIIA.
     
 0.599
pla2g10
Phospholipase A(2).
     
 0.596
pisd
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
     
 0.596
ptgs2
Prostaglandin-endoperoxide synthase 2b.
     
 0.596
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.