Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102691779 | W5LVI0_LEPOC | ENSLOCP00000018538 | ENSLOCP00000000137 | Ubiquitin-conjugating enzyme E2D 4 (putative); Belongs to the ubiquitin-conjugating enzyme family. | RWD domain-containing protein. | 0.648 |
LOC102691779 | ube2d2 | ENSLOCP00000018538 | ENSLOCP00000015511 | Ubiquitin-conjugating enzyme E2D 4 (putative); Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin-conjugating enzyme E2D 3; Belongs to the ubiquitin-conjugating enzyme family. | 0.696 |
NUP214 | W5LVI0_LEPOC | ENSLOCP00000007641 | ENSLOCP00000000137 | Nucleoporin 214. | RWD domain-containing protein. | 0.561 |
W5LVI0_LEPOC | LOC102691779 | ENSLOCP00000000137 | ENSLOCP00000018538 | RWD domain-containing protein. | Ubiquitin-conjugating enzyme E2D 4 (putative); Belongs to the ubiquitin-conjugating enzyme family. | 0.648 |
W5LVI0_LEPOC | NUP214 | ENSLOCP00000000137 | ENSLOCP00000007641 | RWD domain-containing protein. | Nucleoporin 214. | 0.561 |
W5LVI0_LEPOC | abi2 | ENSLOCP00000000137 | ENSLOCP00000012660 | RWD domain-containing protein. | Abl-interactor 2b. | 0.529 |
W5LVI0_LEPOC | ccdc12 | ENSLOCP00000000137 | ENSLOCP00000006864 | RWD domain-containing protein. | Coiled-coil domain containing 12. | 0.553 |
W5LVI0_LEPOC | lsm7 | ENSLOCP00000000137 | ENSLOCP00000005203 | RWD domain-containing protein. | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. | 0.549 |
W5LVI0_LEPOC | ndufs5 | ENSLOCP00000000137 | ENSLOCP00000001310 | RWD domain-containing protein. | NADH:ubiquinone oxidoreductase subunit S5. | 0.527 |
W5LVI0_LEPOC | ube2d1 | ENSLOCP00000000137 | ENSLOCP00000007781 | RWD domain-containing protein. | Ubiquitin-conjugating enzyme E2D 1b; Belongs to the ubiquitin-conjugating enzyme family. | 0.648 |
W5LVI0_LEPOC | ube2d2 | ENSLOCP00000000137 | ENSLOCP00000015511 | RWD domain-containing protein. | Ubiquitin-conjugating enzyme E2D 3; Belongs to the ubiquitin-conjugating enzyme family. | 0.648 |
W5LVI0_LEPOC | ube2d3 | ENSLOCP00000000137 | ENSLOCP00000014834 | RWD domain-containing protein. | Ubiquitin-conjugating enzyme E2D 3; Belongs to the ubiquitin-conjugating enzyme family. | 0.648 |
W5LVI0_LEPOC | ube2t | ENSLOCP00000000137 | ENSLOCP00000011792 | RWD domain-containing protein. | Ubiquitin-conjugating enzyme E2T (putative); Belongs to the ubiquitin-conjugating enzyme family. | 0.613 |
abi2 | W5LVI0_LEPOC | ENSLOCP00000012660 | ENSLOCP00000000137 | Abl-interactor 2b. | RWD domain-containing protein. | 0.529 |
abi2 | lsm7 | ENSLOCP00000012660 | ENSLOCP00000005203 | Abl-interactor 2b. | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. | 0.444 |
ccdc12 | W5LVI0_LEPOC | ENSLOCP00000006864 | ENSLOCP00000000137 | Coiled-coil domain containing 12. | RWD domain-containing protein. | 0.553 |
ccdc12 | ndufs5 | ENSLOCP00000006864 | ENSLOCP00000001310 | Coiled-coil domain containing 12. | NADH:ubiquinone oxidoreductase subunit S5. | 0.539 |
lsm7 | W5LVI0_LEPOC | ENSLOCP00000005203 | ENSLOCP00000000137 | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. | RWD domain-containing protein. | 0.549 |
lsm7 | abi2 | ENSLOCP00000005203 | ENSLOCP00000012660 | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. | Abl-interactor 2b. | 0.444 |
ndufs5 | W5LVI0_LEPOC | ENSLOCP00000001310 | ENSLOCP00000000137 | NADH:ubiquinone oxidoreductase subunit S5. | RWD domain-containing protein. | 0.527 |
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