Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
W5LVR7_LEPOC | W5M3F8_LEPOC | ENSLOCP00000000224 | ENSLOCP00000002916 | Uncharacterized protein. | TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.603 |
W5LVR7_LEPOC | W5M865_LEPOC | ENSLOCP00000000224 | ENSLOCP00000004573 | Uncharacterized protein. | VWFA domain-containing protein. | 0.499 |
W5LVR7_LEPOC | W5MQE4_LEPOC | ENSLOCP00000000224 | ENSLOCP00000010603 | Uncharacterized protein. | Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. | 0.640 |
W5LVR7_LEPOC | eny2 | ENSLOCP00000000224 | ENSLOCP00000003590 | Uncharacterized protein. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.676 |
W5LVR7_LEPOC | itsn1 | ENSLOCP00000000224 | ENSLOCP00000008086 | Uncharacterized protein. | Intersectin 1 (SH3 domain protein). | 0.512 |
W5LVR7_LEPOC | itsn2 | ENSLOCP00000000224 | ENSLOCP00000001168 | Uncharacterized protein. | Intersectin 2b. | 0.663 |
W5LVR7_LEPOC | supt3h | ENSLOCP00000000224 | ENSLOCP00000019468 | Uncharacterized protein. | SPT3 homolog, SAGA and STAGA complex component. | 0.677 |
W5LVR7_LEPOC | tada3 | ENSLOCP00000000224 | ENSLOCP00000017913 | Uncharacterized protein. | Transcriptional adaptor 3 (NGG1 homolog, yeast)-like. | 0.632 |
W5LVR7_LEPOC | taf12 | ENSLOCP00000000224 | ENSLOCP00000004124 | Uncharacterized protein. | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.624 |
W5LVR7_LEPOC | taf9b | ENSLOCP00000000224 | ENSLOCP00000016900 | Uncharacterized protein. | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.598 |
W5M3F8_LEPOC | W5LVR7_LEPOC | ENSLOCP00000002916 | ENSLOCP00000000224 | TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | Uncharacterized protein. | 0.603 |
W5M3F8_LEPOC | W5M865_LEPOC | ENSLOCP00000002916 | ENSLOCP00000004573 | TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | VWFA domain-containing protein. | 0.567 |
W5M3F8_LEPOC | W5MQE4_LEPOC | ENSLOCP00000002916 | ENSLOCP00000010603 | TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. | 0.998 |
W5M3F8_LEPOC | eny2 | ENSLOCP00000002916 | ENSLOCP00000003590 | TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.993 |
W5M3F8_LEPOC | supt3h | ENSLOCP00000002916 | ENSLOCP00000019468 | TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | SPT3 homolog, SAGA and STAGA complex component. | 0.996 |
W5M3F8_LEPOC | tada3 | ENSLOCP00000002916 | ENSLOCP00000017913 | TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | Transcriptional adaptor 3 (NGG1 homolog, yeast)-like. | 0.996 |
W5M3F8_LEPOC | taf12 | ENSLOCP00000002916 | ENSLOCP00000004124 | TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.999 |
W5M3F8_LEPOC | taf9b | ENSLOCP00000002916 | ENSLOCP00000016900 | TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.999 |
W5M865_LEPOC | W5LVR7_LEPOC | ENSLOCP00000004573 | ENSLOCP00000000224 | VWFA domain-containing protein. | Uncharacterized protein. | 0.499 |
W5M865_LEPOC | W5M3F8_LEPOC | ENSLOCP00000004573 | ENSLOCP00000002916 | VWFA domain-containing protein. | TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.567 |
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