STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grin1Glutamate receptor, ionotropic, N-methyl D-aspartate 1b. (986 aa)    
Predicted Functional Partners:
cask
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
   
 0.996
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
   
0.987
grin2a
Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, a.
   
0.981
grin2c
Glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb.
   
0.981
W5LVW5_LEPOC
Uncharacterized protein.
   
0.979
grin3b
Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb.
   
0.968
W5N265_LEPOC
Glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b.
 
 
0.956
CALML6
Calmodulin like 6.
    
 0.943
dlg1
Discs, large homolog 1 (Drosophila); Belongs to the MAGUK family.
   
 0.894
W5MDW0_LEPOC
Discs, large homolog 2 (Drosophila); Belongs to the MAGUK family.
   
 0.894
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.