STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fut11Alpha-(1,3)-fucosyltransferase; Probable fucosyltransferase; Belongs to the glycosyltransferase 10 family. (479 aa)    
Predicted Functional Partners:
hexb
Beta-hexosaminidase.
    
 0.657
fut8
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
     
 0.625
W5M3Y8_LEPOC
ST3 beta-galactoside alpha-2,3-sialyltransferase 4; Belongs to the glycosyltransferase 29 family.
     
 0.571
SPHK1
Sphingosine kinase 1.
     
 0.561
W5M9M4_LEPOC
ST3 beta-galactoside alpha-2,3-sialyltransferase 3b; Belongs to the glycosyltransferase 29 family.
     
 0.548
W5M0U6_LEPOC
Hexosyltransferase.
     
 0.541
B3GNT4
Hexosyltransferase.
     
 0.541
W5MPK0_LEPOC
Family with sequence similarity 149 member B1.
    
 0.516
W5N8U1_LEPOC
Family with sequence similarity 149 member A.
    
 0.516
A3GALT2
Alpha 1,3-galactosyltransferase 2.
   
 
  0.513
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.