STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psmb2Proteasome subunit beta. (200 aa)    
Predicted Functional Partners:
psma1
Proteasome subunit alpha type.
   
 0.999
psmc4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
  
 0.999
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 0.999
W5MRH9_LEPOC
Proteasome 26S subunit, ATPase 1a; Belongs to the AAA ATPase family.
   
 0.999
psma2
Proteasome subunit alpha type.
   
 0.999
psma3
Proteasome subunit alpha type.
   
 0.999
ubxn7
UBX domain protein 7.
    
  0.999
psma5
Proteasome subunit alpha type.
   
 0.999
psmd11
Proteasome 26S subunit, non-ATPase 11b.
   
 0.999
psmd12
Proteasome 26S subunit, non-ATPase 12.
   
 0.999
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (24%) [HD]