trub2 protein (Lepisosteus oculatus) - STRING interaction network

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trub2

TruB pseudouridine (psi) synthase family member 2. (303 aa)

Predicted Functional Partners:

GAR1

0.985

W5MBV0_LEPOC

0.975

shq1

0.968

nop58

0.968

W5MB94_LEPOC

0.966

W5N7F3_LEPOC

0.916

NAF1

0.911

pes1

0.881

nhp2

0.874

EIF5B

0.867

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIF5B	W5MB94_LEPOC	ENSLOCP00000001619	ENSLOCP00000005653	Eukaryotic translation initiation factor 5B.	Fibrillarin.	0.782
EIF5B	nhp2	ENSLOCP00000001619	ENSLOCP00000011776	Eukaryotic translation initiation factor 5B.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.838
EIF5B	nop58	ENSLOCP00000001619	ENSLOCP00000012525	Eukaryotic translation initiation factor 5B.	NOP58 ribonucleoprotein homolog (yeast).	0.452
EIF5B	pes1	ENSLOCP00000001619	ENSLOCP00000004713	Eukaryotic translation initiation factor 5B.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.581
EIF5B	trub2	ENSLOCP00000001619	ENSLOCP00000000984	Eukaryotic translation initiation factor 5B.	TruB pseudouridine (psi) synthase family member 2.	0.867
GAR1	NAF1	ENSLOCP00000014394	ENSLOCP00000009699	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Nuclear assembly factor 1 ribonucleoprotein.	0.918
GAR1	W5MB94_LEPOC	ENSLOCP00000014394	ENSLOCP00000005653	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Fibrillarin.	0.994
GAR1	W5MBV0_LEPOC	ENSLOCP00000014394	ENSLOCP00000005859	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Nop domain-containing protein.	0.978
GAR1	W5N7F3_LEPOC	ENSLOCP00000014394	ENSLOCP00000016562	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	WD repeat containing, antisense to TP53.	0.988
GAR1	nhp2	ENSLOCP00000014394	ENSLOCP00000011776	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.999
GAR1	nop58	ENSLOCP00000014394	ENSLOCP00000012525	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	NOP58 ribonucleoprotein homolog (yeast).	0.982
GAR1	pes1	ENSLOCP00000014394	ENSLOCP00000004713	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.599
GAR1	shq1	ENSLOCP00000014394	ENSLOCP00000012192	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	SHQ1, H/ACA ribonucleoprotein assembly factor.	0.967
GAR1	trub2	ENSLOCP00000014394	ENSLOCP00000000984	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	TruB pseudouridine (psi) synthase family member 2.	0.985
NAF1	GAR1	ENSLOCP00000009699	ENSLOCP00000014394	Nuclear assembly factor 1 ribonucleoprotein.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.918
NAF1	W5MB94_LEPOC	ENSLOCP00000009699	ENSLOCP00000005653	Nuclear assembly factor 1 ribonucleoprotein.	Fibrillarin.	0.762
NAF1	W5MBV0_LEPOC	ENSLOCP00000009699	ENSLOCP00000005859	Nuclear assembly factor 1 ribonucleoprotein.	Nop domain-containing protein.	0.663
NAF1	nhp2	ENSLOCP00000009699	ENSLOCP00000011776	Nuclear assembly factor 1 ribonucleoprotein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.985
NAF1	nop58	ENSLOCP00000009699	ENSLOCP00000012525	Nuclear assembly factor 1 ribonucleoprotein.	NOP58 ribonucleoprotein homolog (yeast).	0.714
NAF1	pes1	ENSLOCP00000009699	ENSLOCP00000004713	Nuclear assembly factor 1 ribonucleoprotein.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.402