Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
W5LY01_LEPOCSi:ch211-194c3.5. (1205 aa)    
Predicted Functional Partners:
nrip2
Nuclear receptor interacting protein 2.
      
 0.619
clg13h7orf26
Zgc:56409.
      
 0.567
W5NMU1_LEPOC
Dynein light chain.
    
 
 0.546
fam168a
Family with sequence similarity 168 member A.
   
  
 0.530
dynlt1
Dynein, light chain, Tctex-type 1.
    
 
 0.524
hnrnpk
Heterogeneous nuclear ribonucleoprotein K, like.
      
 0.523
vps26a
VPS26, retromer complex component A.
      
 0.520
W5LXX6_LEPOC
Solute carrier family 4 member 11.
      
 0.512
arpc2
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
      
 0.512
dynlt3
Dynein, light chain, Tctex-type 3.
    
 
 0.508
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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