Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LY19_LEPOCNIDO domain-containing protein. (308 aa)    
Predicted Functional Partners:
LOC107076473
VWFD domain-containing protein.
 
   
  0.801
LOC102695064
VWFD domain-containing protein.
 
   
  0.785
W5M2L8_LEPOC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.712
LOC102696124
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.712
ENSLOCP00000017361
annotation not available
   
 0.712
W5M863_LEPOC
Uncharacterized protein.
 
   
  0.709
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
    
  0.568
RANBP2
RAN binding protein 2.
    
  0.565
W5MMW6_LEPOC
Ribosomal protein S9.
    
  0.558
fas
Uncharacterized protein.
    
  0.473
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.