Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC102684298Potassium inwardly-rectifying channel, subfamily J, member 9. (505 aa)    
Predicted Functional Partners:
kcnj3
Potassium inwardly-rectifying channel, subfamily J, member 3a.
   
 0.814
LOC102689214
Potassium voltage-gated channel subfamily J member 19a.
   
 0.814
GABBR2
Gamma-aminobutyric acid (GABA) B receptor, 2.
   
 0.571
LACTB2
Lactamase beta 2.
      
 0.569
larp4b
La ribonucleoprotein domain family, member 4B.
      
 0.569
W5N631_LEPOC
Potassium inwardly-rectifying channel, subfamily J, member 16.
     
  0.556
W5LZ17_LEPOC
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
 0.544
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
 0.544
gnb3
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
    
 0.544
W5N7N1_LEPOC
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
 0.544
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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