STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LY26_LEPOCTroponin T2e, cardiac. (239 aa)    
Predicted Functional Partners:
W5MUB5_LEPOC
Troponin I type 1a (skeletal, slow).
 
 0.972
LOC102696099
Uncharacterized protein.
   
 0.968
LOC102688510
Troponin C type 1a (slow).
   
 0.968
LOC102695900
Troponin C type 1b (slow).
   
 0.968
tnni2
Troponin I type 2a (skeletal, fast), tandem duplicate 4.
 
 0.961
W5LXS1_LEPOC
Uncharacterized protein.
 
 0.950
W5NJS2_LEPOC
Uncharacterized protein.
 
 0.942
W5MUD5_LEPOC
Troponin T type 2b (cardiac).
  
 
 
0.934
myl1
Myosin, light polypeptide 3, skeletal muscle.
   
 0.921
tpm4
Tropomyosin 4a; Belongs to the tropomyosin family.
   
 0.904
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.