STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emc8ER membrane protein complex subunit 8. (200 aa)    
Predicted Functional Partners:
emc2
ER membrane protein complex subunit 2.
   
 0.987
emc6
ER membrane protein complex subunit 6.
   
 0.986
mmgt1
Membrane magnesium transporter 1.
    
 0.983
emc7
ER membrane protein complex subunit 7.
    
 0.983
W5MAJ0_LEPOC
ER membrane protein complex subunit 1.
    
 0.982
emc3
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 0.958
W5LWI9_LEPOC
Uncharacterized protein.
    
 0.954
LOC102693594
Zgc:86609.
    
 0.954
gins2
DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family.
      
 0.540
W5LYZ5_LEPOC
Uncharacterized protein.
     
 
0.540
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.