Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
W5LY68_LEPOCPalmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (161 aa)    
Predicted Functional Partners:
W5MXW8_LEPOC
WRN RecQ like helicase.
    
 0.553
W5NFW0_LEPOC
Protection of telomeres 1 homolog.
    
 0.542
golga7b
Golgin A7 family, member Ba.
   
 0.531
golga7
Golgin A7.
   
 0.531
LOC107080026
Uncharacterized protein.
    
 0.482
W5MBS7_LEPOC
Uncharacterized protein.
      
 0.452
LOC107079791
Si:ch211-225b11.4.
      
 0.452
THADA
THADA armadillo repeat containing.
      
 0.452
rad50
RAD50 homolog, double strand break repair protein.
    
 0.430
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.418
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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