Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
W5LY72_LEPOCThrombospondin, type I, domain containing 7Ba. (1595 aa)    
Predicted Functional Partners:
W5NC92_LEPOC
Peptidoglycan recognition protein 5.
      
 0.657
AREL1
Apoptosis resistant E3 ubiquitin protein ligase 1.
      
 0.626
SBSPON
Somatomedin B and thrombospondin type 1 domain containing.
     
 0.572
tlk1
Tousled-like kinase 1a.
      
 0.524
gorasp2
Golgi reassembly stacking protein 2.
      
 0.524
nphs1
NPHS1 adhesion molecule, nephrin.
      
 0.522
shisa3
Shisa family member 3.
      
 0.517
plce1
Phospholipase C, epsilon 1.
      
 0.515
pofut2
Protein O-fucosyltransferase 2.
     
  0.504
W5M140_LEPOC
REST corepressor 2.
      
 0.499
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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