Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ect2Epithelial cell transforming 2. (969 aa)    
Predicted Functional Partners:
kif23
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.993
LOC102682992
Si:ch1073-416j23.1.
   
 
 0.981
racgap1
Rac GTPase activating protein 1.
   
 
 0.981
W5NJ26_LEPOC
Uncharacterized protein.
   
  
 0.956
melk
Non-specific serine/threonine protein kinase.
   
 
 0.938
kif4a
Kinesin family member 4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.933
kif11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.926
W5MF36_LEPOC
Centrosomal protein 55 like.
   
 
 0.921
W5ML42_LEPOC
Abnormal spindle microtubule assembly.
   
 
 0.914
rnd3
Rho family GTPase 3b.
    
 0.907
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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