STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnm1lDynamin 1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (725 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.995
itsn2
Intersectin 2b.
    
 
 0.924
pgam5
PGAM family member 5, serine/threonine protein phosphatase, mitochondrial.
    
 0.882
itsn1
Intersectin 1 (SH3 domain protein).
    
 
 0.835
W5MSM4_LEPOC
Protein kinase domain-containing protein.
   
 0.834
prkn
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 0.827
pink1
PTEN induced kinase 1.
    
 0.825
W5N5X9_LEPOC
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.807
W5MIV1_LEPOC
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 0.795
mff
Mitochondrial fission factor.
   
 0.784
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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