Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
W5LYA7_LEPOCPR domain containing 10. (1150 aa)    
Predicted Functional Partners:
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
    
 0.732
polr3b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.671
osgepl1
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.
      
 0.658
znf488
PR domain containing 8.
    
 
 0.652
W5N8G8_LEPOC
Dyskeratosis congenita 1, dyskerin.
    
 0.625
W5NA30_LEPOC
Proteasome 26S subunit, non-ATPase 8.
     
 0.613
psmd3
Proteasome 26S subunit, non-ATPase 3.
    
 0.593
KIF18A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.583
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
    
 
 0.575
W5MB94_LEPOC
Fibrillarin.
    
 
 0.559
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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