STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LYB6_LEPOCElongin A. (637 aa)    
Predicted Functional Partners:
leo1
Uncharacterized protein.
    
 0.997
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.986
W5MB44_LEPOC
Ribosomal protein L5b.
    
 
 0.901
rpl18
Ribosomal protein L18.
   
   0.895
rpl23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.894
rpl13a
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
    
   0.890
W5MCK3_LEPOC
Ribosomal protein L35.
    
   0.890
rpl30
Ribosomal protein L30.
    
   0.890
rpl19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
   0.890
rpl4
Ribosomal protein L4.
    
   0.890
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.