Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ddcDopa decarboxylase. (481 aa)    
Predicted Functional Partners:
th
Tyrosine hydroxylase.
   
 0.977
pah
Phenylalanine hydroxylase.
   
 0.967
TPH1
Tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a.
   
 0.966
TPH2
Tryptophan hydroxylase 2.
   
 0.966
dbh
Dopamine beta-hydroxylase (dopamine beta-monooxygenase).
     
 0.962
LOC102686229
Arylalkylamine N-acetyltransferase 2.
    
 0.959
aanat
Arylalkylamine N-acetyltransferase 1.
    
 0.959
comt
Catechol-O-methyltransferase b.
  
 
 0.943
tat
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
    
 0.934
LOC102691070
Transmembrane O-methyltransferase.
  
 
 0.932
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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