Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
W5LYC8_LEPOCSi:dkeyp-72e1.9. (668 aa)    
Predicted Functional Partners:
cask
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
    
 0.639
W5MY78_LEPOC
Intraflagellar transport 88 homolog.
    
 0.586
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.580
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.567
W5NFZ6_LEPOC
Intraflagellar transport 172.
    
 0.553
ift81
Intraflagellar transport 81 homolog.
    
 0.549
ift80
Uncharacterized protein.
    
 0.526
atp6v0d1
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
      
 0.515
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.509
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.498
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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