STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LYC8_LEPOCSi:dkeyp-72e1.9. (668 aa)    
Predicted Functional Partners:
magi3
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
0.726
W5NC44_LEPOC
MAGI family member, X-linked b.
    
 0.726
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.710
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.695
cask
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
    
 0.672
W5NFZ6_LEPOC
Intraflagellar transport 172.
    
 0.664
ift80
Uncharacterized protein.
    
 0.620
W5MY78_LEPOC
Intraflagellar transport 88 homolog.
    
 0.603
cluap1
Clusterin associated protein 1.
    
 0.588
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.580
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.