Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
spoplSpeckle type BTB/POZ protein like a. (399 aa)    
Predicted Functional Partners:
cul3
Cullin 3a; Belongs to the cullin family.
   
 0.997
gli2
GLI family zinc finger 2b.
   
 0.983
gli1
GLI family zinc finger 1.
   
 0.983
gli3
GLI family zinc finger 3.
   
 0.983
sufu
Suppressor of fused homolog.
     
 0.934
cul1
Cullin 1a; Belongs to the cullin family.
   
 0.922
LOC102689826
Speckle type BTB/POZ protein.
  
  
 
0.900
ar
Androgen receptor.
    
 
 0.888
LOC102696687
Uncharacterized protein.
    
 
 0.875
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
    
 
 0.875
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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