STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LYE7_LEPOCDHR-1 domain-containing protein; Belongs to the DOCK family. (927 aa)    
Predicted Functional Partners:
W5LYA2_LEPOC
DHR-2 domain-containing protein; Belongs to the DOCK family.
 
     0.945
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.883
W5MJT7_LEPOC
V-crk avian sarcoma virus CT10 oncogene homolog.
    
 0.883
elmo2
Engulfment and cell motility 2.
  
 
 0.865
elmo3
Engulfment and cell motility 3.
  
 
 0.856
elmo1
Engulfment and cell motility 1 (ced-12 homolog, C. elegans).
  
 
 0.855
rac1
Rac family small GTPase 1b.
   
 0.839
RAC3
Rac family small GTPase 3.
   
 0.839
LOC102690743
Ras homolog gene family, member Gc.
   
 0.716
rhog
Ras homolog family member Gb.
   
 0.716
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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