STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102684193Guanylate cyclase. (1109 aa)    
Predicted Functional Partners:
LOC102689797
Phosphodiesterase.
   
 0.934
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
   
 
 0.923
pde6b
Phosphodiesterase.
   
 0.911
W5MFA7_LEPOC
Phosphodiesterase.
   
 0.908
guca1b
Guanylate cyclase activator 1B.
  
 0.907
LOC102691117
Phosphodiesterase.
    
 0.890
W5M2C2_LEPOC
Phosphodiesterase.
    
 0.890
pde3b
Phosphodiesterase.
    
 0.890
pde9a
Phosphodiesterase.
    
 0.890
pde5a
Phosphodiesterase.
    
 0.890
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.