Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nxph2Neurexophilin; May be signaling molecules that resemble neuropeptides. (266 aa)    
Predicted Functional Partners:
W5M3C2_LEPOC
Uncharacterized protein.
   
 
 0.683
W5M3E5_LEPOC
LAM_G_DOMAIN domain-containing protein.
   
 
 0.683
W5MQX3_LEPOC
Neurexin 3a.
   
 
 0.683
nrxn1
Neurexin 1b.
   
 
 0.683
tafa3
Si:dkey-238f9.1.
  
  
 0.580
gad2
Glutamate decarboxylase 2.
   
  
 0.549
W5MVM4_LEPOC
Uncharacterized protein.
  
   
 0.543
mid1ip1
MID1 interacting protein 1a.
      
 0.523
LOC102682519
Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 1.
  
  
 0.516
W5MNI9_LEPOC
ATP-binding cassette, sub-family B (MDR/TAP), member 11b.
      
 0.516
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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