Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
lypla2Lysophospholipase 2. (232 aa)    
Predicted Functional Partners:
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
   
 0.963
pnpla7
Patatin-like phospholipase domain containing 7b.
  
 
 0.903
LOC102698342
Patatin-like phospholipase domain containing 6.
  
 
 0.903
LOC102688887
Retinoic acid receptor responder 3-like.
     
 0.902
LOC107078006
Zgc:194275.
     
  0.900
chaf1b
Chromatin assembly factor 1, subunit B.
    
 
 0.788
ARF1
ADP ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
     
 0.684
crls1
Cardiolipin synthase 1.
  
  
 0.672
gap43
Growth associated protein 43.
    
 0.660
abhd13
Abhydrolase domain containing 13.
     
 0.640
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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