Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
W5LYH6_LEPOCProtein tyrosine phosphatase receptor type A. (775 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
    
 0.928
ptpre
Receptor-type tyrosine-protein phosphatase.
    
   0.873
znf367
Zinc finger protein 367.
    
 
 0.766
znf366
Zinc finger protein 366.
    
 
 0.734
IL1RAP
Interleukin 1 receptor accessory protein.
    
 0.702
DDRGK1
DDRGK domain containing 1.
      
 0.682
W5MBD8_LEPOC
UV radiation resistance associated gene.
    
   0.632
LOC102689667
Tyrosine-protein kinase.
    
 0.627
ptk6
Tyrosine-protein kinase.
    
 0.627
srms
Tyrosine-protein kinase.
    
 0.627
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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