STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102691721FIIND domain-containing protein. (568 aa)    
Predicted Functional Partners:
W5NJS5_LEPOC
Glutamate-cysteine ligase, catalytic subunit.
    
 0.706
sord
Sorbitol dehydrogenase.
  
 0.640
kcnab1
Potassium voltage-gated channel, shaker-related subfamily, beta member 1 a.
  
 0.621
W5M839_LEPOC
Potassium voltage-gated channel, shaker-related subfamily, beta member 2 a.
  
 0.621
LOC102683354
Aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase).
  
 0.621
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
  
 0.621
adhfe1
Alcohol dehydrogenase iron containing 1.
   
 0.576
tkfc
Triokinase/FMN cyclase.
   
 
 0.558
W5MG55_LEPOC
Glyoxalase domain containing 4.
  
 0.556
mcee
Methylmalonyl CoA epimerase.
  
 0.556
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.