Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
W5LYI4_LEPOCRho-GAP domain-containing protein. (340 aa)    
Predicted Functional Partners:
usf2
Upstream transcription factor 2, c-fos interacting.
   
 0.991
fosl1
FOS-like antigen 1a.
    
 
 0.819
W5N0P4_LEPOC
E1A binding protein p300 a.
    
 0.712
rbbp5
Retinoblastoma binding protein 5.
    
 
 0.681
W5N7Y2_LEPOC
Bromodomain PHD finger transcription factor.
    
 
 0.680
W5MEM1_LEPOC
Sp1 transcription factor.
    
 0.679
taf6
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 
 0.663
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 
 0.660
GTF3C1
General transcription factor IIIC subunit 1.
    
   0.651
W5MQE4_LEPOC
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
   0.651
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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