Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
W5LYJ4_LEPOCMethenyltetrahydrofolate synthetase domain containing. (434 aa)    
Predicted Functional Partners:
W5MBV0_LEPOC
Nop domain-containing protein.
   
    0.921
utp15
UTP15 small subunit processome component.
   
    0.918
smim12
Small integral membrane protein 12.
  
    0.918
nipsnap1
Nipsnap homolog 1 (C. elegans).
   
    0.857
nipsnap2
Nipsnap homolog 2.
   
    0.857
W5MND4_LEPOC
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.853
LOC102683569
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.853
ASF1A
Anti-silencing function 1A histone chaperone.
   
    0.821
asf1b
Anti-silencing function 1Ba histone chaperone.
   
    0.821
mthfd1
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b.
   
 0.802
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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