STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LYJ5_LEPOCWD_REPEATS_REGION domain-containing protein. (121 aa)    
Predicted Functional Partners:
W5LV61_LEPOC
Damage-specific DNA binding protein 1.
    
 0.958
cul4a
Cullin 4A; Belongs to the cullin family.
    
 0.938
cul4b
Cullin 4B; Belongs to the cullin family.
    
 0.938
ak9
Adenylate kinase 9.
    
  0.890
dda1
DET1 and DDB1 associated 1.
    
  0.878
dcaf5
Ddb1 and cul4 associated factor 5.
    
  0.873
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.863
wdtc1
WD and tetratricopeptide repeats 1.
    
 0.845
dcaf4
WD repeat domain 21.
     
 0.843
COPS6
COP9 signalosome subunit 6.
    
 0.840
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.