STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LYJ8_LEPOCRibosomal protein S6 kinase, polypeptide 4. (297 aa)    
Predicted Functional Partners:
LOC102695970
Mitogen-activated protein kinase.
  
 
0.907
W5NEL3_LEPOC
Mitogen-activated protein kinase 12b.
  
 
0.902
W5NEK9_LEPOC
RAD50 interactor 1.
    
 0.870
stx18
Syntaxin 18.
    
 0.862
LOC102685390
Mitogen-activated protein kinase.
  
 
0.860
use1
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
 0.858
W5MZ31_LEPOC
Activating transcription factor 4b.
     
 0.857
W5N9G8_LEPOC
Ribosomal protein S6 kinase.
  
  
 
0.857
LOC102698741
Mitogen-activated protein kinase.
  
 
0.856
creb5
cAMP responsive element binding protein 5b.
    
 0.825
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.