STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc42Cell division cycle 42. (195 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2b.
    
 0.998
W5MEU0_LEPOC
Rho GTPase activating protein 1.
    
 0.986
baiap2
BAI1-associated protein 2b.
   
 0.985
pak2
Non-specific serine/threonine protein kinase.
   
 0.981
W5NAX1_LEPOC
WASP actin nucleation promoting factor b.
   
 0.981
wasl
WASP like actin nucleation promoting factor b.
   
 0.981
pak1
Non-specific serine/threonine protein kinase.
   
 0.980
PAK3
Non-specific serine/threonine protein kinase.
   
 0.980
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 0.979
pard6g
Par-6 family cell polarity regulator gamma b.
    
 0.979
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.