Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
W5LYL3_LEPOCGolgi associated kinase 1A. (579 aa)    
Predicted Functional Partners:
mab21l3
Mab-21-like 3.
   
    0.962
fam20b
FAM20B glycosaminoglycan xylosylkinase.
      
 0.715
fjx1
Four-jointed box kinase 1.
      
 0.701
W5MGW2_LEPOC
Stathmin domain containing 1.
      
 0.676
kiaa1958
Si:ch211-126i22.5.
      
 0.630
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
      
 0.619
W5MC05_LEPOC
Large 60S subunit nuclear export GTPase 1.
      
 0.615
armc7
Armadillo repeat containing 7.
      
 0.615
ttc22
Tetratricopeptide repeat domain 22.
      
 0.606
riiad1
RIIa domain-containing protein.
      
 0.524
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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